SubtiBank SubtiBank
Version comparison:

2019-08-01 11:45:492025-05-15 19:00:55

The protein

Catalyzed reaction/ biological activity

Endonucleolytic cleavage to 5'-phosphomonoester (according to uniProt)

cleaves 16S rRNA 2 nts downstream of the 3' end [PubMed|26883633]

cleaves both 5'- and 3'-sites of the small cytoplasmic RNA precursor (''[[gene|scr]]'')

degradation of ''[[gene|txpA]]'' mRNA-[[protein|FFCE5AD9E04E6D5F7970E89781C545E7DBDF45F0]] RNA duplex (encoded on the [SW|Skin element]) [Pubmed|23300471]

degradation of ''[[gene|yonT]]'' mRNA-''[[gene|SR6]]'' RNA duplex (encoded on the [[SP-beta prophage]]) [Pubmed|23300471]

degradation of the ''[[gene|roxS]]''-''[[gene|ytdI]]'' and ''[[gene|roxS]]-[[gene|sucC]]'' RNA duplexes [Pubmed|25643072]

Endonucleolytic cleavage to 5'-phosphomonoester (according to UniProt)

cleaves 16S rRNA 2 nts downstream of the 3' end [PubMed|26883633]

cleaves both 5'- and 3'-sites of the small cytoplasmic RNA precursor (''[[gene|scr]]'')

degradation of ''[[gene|txpA]]'' mRNA-[[protein|FFCE5AD9E04E6D5F7970E89781C545E7DBDF45F0]] RNA duplex (encoded on the [SW|Skin element]) [Pubmed|23300471]

degradation of ''[[gene|yonT]]'' mRNA-''[[gene|SR6]]'' RNA duplex (encoded on the [[SP-beta prophage]]) [Pubmed|23300471]

degradation of the ''[[gene|roxS]]''-''[[gene|ytdI]]'' and ''[[gene|roxS]]-[[gene|sucC]]'' RNA duplexes [Pubmed|25643072]

References

Reviews

17194582, 16179796, 8936814, 16855311, 23300472, 25292357, 25808661, 25878039, 29651979

17194582, 16179796, 8936814, 16855311, 23300472, 25292357, 25808661, 25878039, 29651979, 31464530

The protein

[SW|Domains]

RNase III domain (aa 20-149) (according to UniProt)

DRBM domain (aa 175-222) (according to UniProt)